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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015850645.1_cds_XP_016511232.1_23995
CDS Infomation

[gene=LOC107828443] [db_xref=GeneID:107828443] [protein=1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2] [protein_id=XP_016511232.1] [location=complement(join(2091..2157,2254..2324,2513..2637,2722..2836,2953..3047,3871..3982,6609..6626))] [gbkey=CDS]
Sequence

ATGGGTTCCATCGCAAAGGATCCACGAGAGGACGTTATTCAAGCATGGTACATGGATGAC
AGCGATGAGGACCAGAGGCTTCCTCATCACCGTGAGCCAAAGGAATTTGTGTCTCTTGAC
AAACTTGCTGAGCTTGGAGTGCTCAGCTGGAGACTTGATGCTGACAATTATGAGACAGAC
GAGGAGTTGAAGAAAATTCGGGAGGCTCGCGGCTATTCTTACATGGATTTCTGTGAGGTT
TGCCCTGAGAAACTACCGAATTACGAGGAGAAAATCAAGAACTTTTTTGAAGAACACCTG
CACACCGACGAAGAGATCCGTTACTGTGTTGCAGGAAGTGGTTATTTTGATCTCCGGGAT
CGGAATGATGCCTGGATTCGTGTCTGGGTAAAGAAAGGTGGAATGATTGTTCTGCCTGCT
GGAATTTATCACCGCTTCACACTTGATTCAGACAATTACATTAAGGCAATGCGACTCTTT
GTTGGTGACCCAATTTGGACTCCATACAATCGCCCACATGACCATCTCCCTGCAAGGAAA
GAATATATTGAATCGTTTGTCCATGCAGAAGGCGCTGGCTGTGCAGTTAATGCTGCTGCT
TAA

Peptide Sequence

PEP ID

XP_016511232.1
PEP Infomation

PREDICTED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 [Nicotiana tabacum]
Sequence

MGSIAKDPREDVIQAWYMDDSDEDQRLPHHREPKEFVSLDKLAELGVLSWRLDADNYETD
EELKKIREARGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDLRD
RNDAWIRVWVKKGGMIVLPAGIYHRFTLDSDNYIKAMRLFVGDPIWTPYNRPHDHLPARK
EYIESFVHAEGAGCAVNAAA

Transcript Sequence

Gene sequence data has not been registered.